STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
epsBChain length determinant protein. (291 aa)    
Predicted Functional Partners:
ywqD
Capsular exopolysaccharide family; COG: COG0489.
 
 
 0.997
epsD
PHP domain protein; COG: COG4464.
 
 
 0.991
EEJ71579.1
Cell envelope-like function transcriptional attenuator common domain protein; COG: COG1316.
 
  
 0.941
epsE
Bacterial sugar transferase; COG: COG2148.
 
  
 0.888
EEJ71584.1
Glycosyltransferase, group 1 family protein; COG: COG0438.
 
  
 0.636
EEJ71591.1
Polysaccharide biosynthesis protein.
 
  
 0.567
EEJ71587.1
Capsular polysaccharide synthesis protein.
 
   
 0.540
EEJ71586.1
Glycosyltransferase family 28 C-terminal domain protein.
     
 0.497
EEJ71588.1
Glycosyltransferase, group 2 family protein; COG: COG0463.
  
  
 0.486
EEJ71585.1
Oligosaccharide biosynthesis protein Alg14 like protein.
     
 0.483
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.