STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71464.1Peptidase propeptide and YPEB domain protein. (195 aa)    
Predicted Functional Partners:
EEJ71465.1
Hypothetical protein.
 
     0.647
EEJ71732.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
     0.508
EEJ73077.1
Hypothetical protein.
  
     0.504
EEJ72102.1
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.500
ribA
GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
   
   0.498
EEJ71466.1
Hypothetical protein.
       0.498
EEJ71877.1
Hypothetical protein.
  
    0.486
EEJ71875.1
Hypothetical protein.
  
    0.454
marR
Transcriptional regulator, MarR family.
 
     0.440
EEJ72765.1
Hypothetical protein.
  
     0.425
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.