STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71432.1ABC transporter, permease protein; COG: COG0765. (168 aa)    
Predicted Functional Partners:
EEJ71430.1
Hypothetical protein; COG: COG0834.
 0.999
glnQ
ABC transporter, ATP-binding protein; COG: COG1126.
 0.999
EEJ72482.1
ABC transporter, ATP-binding protein; COG: COG1126.
 0.994
EEJ71391.1
ABC transporter, ATP-binding protein; COG: COG1126.
 0.994
EEJ71334.1
ABC transporter, ATP-binding protein; COG: COG1126.
 0.993
EEJ72906.1
ABC transporter, ATP-binding protein; COG: COG1126.
 0.991
glnH1
ABC transporter, substrate-binding protein, family 3; COG: COG0834.
 0.873
EEJ71459.1
Hypothetical protein.
 
 0.862
EEJ72908.1
ABC transporter, permease protein; COG: COG0765.
  
 
0.817
EEJ71691.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; COG: COG1136.
 
 
 
  0.812
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.