STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71406.1Hypothetical protein. (372 aa)    
Predicted Functional Partners:
EEJ72075.1
Hypothetical protein.
  
     0.738
EEJ72938.1
DNA-binding helix-turn-helix protein.
  
     0.639
EEJ71759.1
Transporter, major facilitator family protein.
  
     0.622
EEJ72936.1
DNA-binding helix-turn-helix protein.
  
    0.609
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
    
  0.599
EEJ71494.1
Hypothetical protein.
 
  
 0.523
pepO2
Peptidase family M13; COG: COG3590.
       0.497
EEJ71732.1
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
     0.486
EEJ72937.1
DNA-binding helix-turn-helix protein.
  
     0.460
EEJ71846.1
Hypothetical protein.
 
     0.455
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.