STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71360.1Hemerythrin HHE cation binding domain protein; COG: COG2461. (403 aa)    
Predicted Functional Partners:
EEJ71361.1
Hypothetical protein; COG: COG2151.
 
     0.849
nrdG
Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
       0.634
nrdD
Anaerobic ribonucleoside-triphosphate reductase; COG: COG1328.
       0.634
EEJ71364.1
Hypothetical protein.
       0.634
EEJ70956.1
ABC transporter, solute-binding protein.
   
    0.634
EEJ71365.1
Hypothetical protein.
 
     0.599
asnB
Asparagine synthase (glutamine-hydrolyzing); COG: COG0367.
       0.507
EEJ71368.1
Hypothetical protein.
 
     0.466
flpA
Cyclic nucleotide-binding domain protein; COG: COG0664.
 
     0.401
EEJ71609.1
Transcriptional regulator, TetR family.
  
     0.401
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.