STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71299.1Metallo-beta-lactamase domain protein; COG: COG1235. (262 aa)    
Predicted Functional Partners:
yycI
YycH protein.
  
  
 0.900
yycH
YycH protein.
  
  
 0.900
walK
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG5002.
  
  
 0.882
EEJ71303.1
Response regulator receiver domain protein; COG: COG0745.
  
  
 0.860
htrA
Trypsin; COG: COG0265.
  
  
 0.767
EEJ70934.1
Hypothetical protein.
   
    0.567
EEJ72358.1
Response regulator receiver domain protein; COG: COG0745.
  
  
 0.548
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.407
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.