EEJ71176.1 protein (Lactobacillus ultunensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EEJ71176.1

ABC transporter, substrate-binding protein, family 5; COG: COG4166. (540 aa)

Predicted Functional Partners:

EEJ71179.1

0.967

EEJ71180.1

0.965

EEJ71177.1

0.955

EEJ71181.1

0.953

EEJ71182.1

0.948

EEJ71985.1

0.910

oppB

0.810

oppD

0.790

EEJ72326.1

0.787

oppF

0.785

Your Current Organism:

Lactobacillus ultunensis

NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEJ71176.1	EEJ71177.1	HMPREF0548_1908	HMPREF0548_1909	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	0.955
EEJ71176.1	EEJ71179.1	HMPREF0548_1908	HMPREF0548_1911	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, permease protein; COG: COG0601.	0.967
EEJ71176.1	EEJ71180.1	HMPREF0548_1908	HMPREF0548_1912	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, permease protein; COG: COG1173.	0.965
EEJ71176.1	EEJ71181.1	HMPREF0548_1908	HMPREF0548_1913	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, ATP-binding protein; COG: COG0444; Belongs to the ABC transporter superfamily.	0.953
EEJ71176.1	EEJ71182.1	HMPREF0548_1908	HMPREF0548_1914	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, ATP-binding protein; COG: COG4608; Belongs to the ABC transporter superfamily.	0.948
EEJ71176.1	EEJ71985.1	HMPREF0548_1908	HMPREF0548_1227	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	0.910
EEJ71176.1	EEJ72326.1	HMPREF0548_1908	HMPREF0548_0848	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, permease protein; COG: COG1173.	0.787
EEJ71176.1	oppB	HMPREF0548_1908	HMPREF0548_0847	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, permease protein; COG: COG0601.	0.810
EEJ71176.1	oppD	HMPREF0548_1908	HMPREF0548_0845	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, ATP-binding protein; COG: COG0444; Belongs to the ABC transporter superfamily.	0.790
EEJ71176.1	oppF	HMPREF0548_1908	HMPREF0548_0846	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, ATP-binding protein; COG: COG4608; Belongs to the ABC transporter superfamily.	0.785
EEJ71177.1	EEJ71176.1	HMPREF0548_1909	HMPREF0548_1908	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	0.955
EEJ71177.1	EEJ71179.1	HMPREF0548_1909	HMPREF0548_1911	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, permease protein; COG: COG0601.	0.970
EEJ71177.1	EEJ71180.1	HMPREF0548_1909	HMPREF0548_1912	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, permease protein; COG: COG1173.	0.967
EEJ71177.1	EEJ71181.1	HMPREF0548_1909	HMPREF0548_1913	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, ATP-binding protein; COG: COG0444; Belongs to the ABC transporter superfamily.	0.957
EEJ71177.1	EEJ71182.1	HMPREF0548_1909	HMPREF0548_1914	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, ATP-binding protein; COG: COG4608; Belongs to the ABC transporter superfamily.	0.953
EEJ71177.1	EEJ71985.1	HMPREF0548_1909	HMPREF0548_1227	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	0.909
EEJ71177.1	EEJ72326.1	HMPREF0548_1909	HMPREF0548_0848	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, permease protein; COG: COG1173.	0.787
EEJ71177.1	oppB	HMPREF0548_1909	HMPREF0548_0847	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, permease protein; COG: COG0601.	0.813
EEJ71177.1	oppD	HMPREF0548_1909	HMPREF0548_0845	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, ATP-binding protein; COG: COG0444; Belongs to the ABC transporter superfamily.	0.790
EEJ71177.1	oppF	HMPREF0548_1909	HMPREF0548_0846	ABC transporter, substrate-binding protein, family 5; COG: COG4166.	ABC transporter, ATP-binding protein; COG: COG4608; Belongs to the ABC transporter superfamily.	0.785

page 1 of 6

Server load: medium (48%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About