Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EEJ71176.1ABC transporter, substrate-binding protein, family 5; COG: COG4166. (540 aa)    
Predicted Functional Partners:
EEJ71179.1
ABC transporter, permease protein; COG: COG0601.
 0.993
EEJ71180.1
ABC transporter, permease protein; COG: COG1173.
 
 0.988
EEJ71182.1
ABC transporter, ATP-binding protein; COG: COG4608; Belongs to the ABC transporter superfamily.
 0.986
EEJ71181.1
ABC transporter, ATP-binding protein; COG: COG0444; Belongs to the ABC transporter superfamily.
 
 0.984
EEJ71177.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166.
 
  
 
0.955
EEJ71985.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166.
 
  
 
0.912
EEJ72739.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166.
  
  
 
0.909
EEJ72801.1
ABC transporter, substrate-binding protein, family 5; COG: COG4166.
  
  
 
0.907
oppA1
ABC transporter, substrate-binding protein, family 5; COG: COG4166.
  
  
 
0.907
oppB
ABC transporter, permease protein; COG: COG0601.
  
 
 0.663
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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