STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ71030.1Efflux ABC transporter, permease protein. (353 aa)    
Predicted Functional Partners:
EEJ71029.1
ABC transporter, ATP-binding protein; COG: COG1136.
 
 0.993
EEJ71611.1
ABC transporter, ATP-binding protein; COG: COG1136.
 
 0.969
EEJ71783.1
ABC transporter, ATP-binding protein; COG: COG1136.
  
 0.852
EEJ71691.1
Putative bacteriocin export ABC transporter, lactococcin 972 group; COG: COG1136.
  
 0.852
EEJ71848.1
ABC transporter, ATP-binding protein; COG: COG1136.
  
 0.820
EEJ71720.1
ABC transporter, ATP-binding protein; COG: COG1136.
  
 0.820
EEJ71208.1
ABC transporter, ATP-binding protein; COG: COG1136.
  
 0.820
EEJ71609.1
Transcriptional regulator, TetR family.
 
  
 0.779
EEJ71031.1
Transcriptional regulator, TetR family.
 
  
 0.566
yclK
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642.
  
 
 0.405
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.