STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frcCoA-transferase family III protein; COG: COG1804; Belongs to the CoA-transferase III family. (395 aa)    
Predicted Functional Partners:
citE
Putative citrate (pro-3S)-lyase, beta subunit; COG: COG2301; Belongs to the HpcH/HpaI aldolase family.
 
 0.921
EEJ71313.1
COG: COG1053.
    
  0.729
EEJ71034.1
Hypothetical protein; COG: COG1804; 2.8.3.16; Belongs to the CoA-transferase III family.
   
0.662
oxc
oxalyl-CoA decarboxylase; COG: COG0028; Belongs to the TPP enzyme family.
 
  
 0.549
EEJ71031.1
Transcriptional regulator, TetR family.
  
    0.485
thil
acetyl-CoA C-acetyltransferase; COG: COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.455
EEJ71002.1
Transporter, auxin efflux carrier (AEC) family protein; COG: COG0679.
 
  
 0.408
EEJ72524.1
Nitroreductase family protein.
  
 
  0.406
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.