STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEJ70953.1OsmC-like protein. (156 aa)    
Predicted Functional Partners:
EEJ70954.1
Hypothetical protein.
       0.779
frnE
DsbA-like protein; COG: COG2761.
       0.776
trxB-2
Thioredoxin-disulfide reductase; COG: COG0492.
  
  
 0.707
EEJ70949.1
Hypothetical protein.
 
  
 0.644
EEJ70950.1
Transcriptional regulator, ArsR family; COG: COG0640.
  
  
 0.637
accC
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
  0.417
thil
acetyl-CoA C-acetyltransferase; COG: COG0183; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
  0.414
hmcS
hydroxymethylglutaryl-CoA synthase; COG: COG3425.
    
  0.408
EEJ71898.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG1249.
    
 0.404
EEJ71903.1
Pyridine nucleotide-disulfide oxidoreductase; COG: COG1249.
    
 0.404
Your Current Organism:
Lactobacillus ultunensis
NCBI taxonomy Id: 525365
Other names: L. ultunensis DSM 16047, Lactobacillus ultunensis DSM 16047, Lactobacillus ultunensis str. DSM 16047, Lactobacillus ultunensis strain DSM 16047
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.