STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agaAlpha-galactosidase; COG: COG3345; Pfam: PF02065; InterPro: IPR000111. (325 aa)    
Predicted Functional Partners:
EFI84816.1
Hypothetical protein; COG: COG3345; Pfam: PF02065; InterPro: IPR000111; 3.2.1.22.
     0.988
EFI84819.1
Hypothetical protein; Pfam: PF01547.
 
  
 0.659
EFI84817.1
ABC transporter, permease protein; COG: COG0395; Pfam: PF00528; InterPro: IPR000515.
  
    0.638
EFI84820.1
ABC transporter, solute-binding protein; COG: COG1653; Pfam: PF01547; InterPro: IPR006059.
 
  
 0.598
galT
UTP--hexose-1-phosphate uridylyltransferase; COG: COG4468; Pfam: PF01087,PF02744; InterPro: IPR000766.
 
  
 0.591
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.580
EFI84818.1
ABC transporter, permease protein; COG: COG1175; Pfam: PF00528; InterPro: IPR000515.
  
    0.512
Your Current Organism:
Listeria grayi
NCBI taxonomy Id: 525367
Other names: L. grayi DSM 20601, Listeria grayi ATCC 19120, Listeria grayi DSM 20601, Listeria grayi str. DSM 20601, Listeria grayi strain DSM 20601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.