Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI82943.1 | EFI82944.1 | HMPREF0556_11628 | HMPREF0556_11629 | Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753; InterPro: IPR001279. | Hypothetical protein. | 0.458 |
EFI82943.1 | EFI82945.1 | HMPREF0556_11628 | HMPREF0556_11630 | Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753; InterPro: IPR001279. | Hypothetical protein. | 0.427 |
EFI82944.1 | EFI82943.1 | HMPREF0556_11629 | HMPREF0556_11628 | Hypothetical protein. | Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753; InterPro: IPR001279. | 0.458 |
EFI82944.1 | EFI82945.1 | HMPREF0556_11629 | HMPREF0556_11630 | Hypothetical protein. | Hypothetical protein. | 0.714 |
EFI82944.1 | EFI82946.1 | HMPREF0556_11629 | HMPREF0556_11631 | Hypothetical protein. | CsbD-like protein; Pfam: PF05532; InterPro: IPR008462; Belongs to the UPF0337 (CsbD) family. | 0.606 |
EFI82945.1 | EFI82943.1 | HMPREF0556_11630 | HMPREF0556_11628 | Hypothetical protein. | Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753; InterPro: IPR001279. | 0.427 |
EFI82945.1 | EFI82944.1 | HMPREF0556_11630 | HMPREF0556_11629 | Hypothetical protein. | Hypothetical protein. | 0.714 |
EFI82945.1 | EFI82946.1 | HMPREF0556_11630 | HMPREF0556_11631 | Hypothetical protein. | CsbD-like protein; Pfam: PF05532; InterPro: IPR008462; Belongs to the UPF0337 (CsbD) family. | 0.655 |
EFI82946.1 | EFI82944.1 | HMPREF0556_11631 | HMPREF0556_11629 | CsbD-like protein; Pfam: PF05532; InterPro: IPR008462; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein. | 0.606 |
EFI82946.1 | EFI82945.1 | HMPREF0556_11631 | HMPREF0556_11630 | CsbD-like protein; Pfam: PF05532; InterPro: IPR008462; Belongs to the UPF0337 (CsbD) family. | Hypothetical protein. | 0.655 |