STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YxeAHypothetical protein; COG: COG5294; Pfam: PF06486; InterPro: IPR006542. (120 aa)    
Predicted Functional Partners:
EFI83467.1
Efflux ABC transporter, permease protein; COG: COG0577; Pfam: PF02687.
 
     0.906
MacB_4
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
 
  
 0.845
EFI85164.1
Hypothetical protein.
  
     0.510
PhoR_1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00512,PF02518; InterPro: IPR003594.
 
     0.441
YtgP_2
Polysaccharide biosynthesis protein; COG: COG2244; Pfam: PF01943; InterPro: IPR002797.
       0.417
QueT
Hypothetical protein; COG: COG4708; Pfam: PF06177; InterPro: IPR010387.
  
     0.411
ThiT
Putative proton-coupled thiamine transporter YuaJ; COG: COG3859; InterPro: IPR012651.
  
     0.409
Your Current Organism:
Listeria grayi
NCBI taxonomy Id: 525367
Other names: L. grayi DSM 20601, Listeria grayi ATCC 19120, Listeria grayi DSM 20601, Listeria grayi str. DSM 20601, Listeria grayi strain DSM 20601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.