node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFI83797.1 | EFI83800.1 | HMPREF0556_12482 | HMPREF0556_12485 | Hypothetical protein; COG: COG1550; Pfam: PF04456; InterPro: IPR007546. | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | 0.754 |
EFI83797.1 | infB | HMPREF0556_12482 | HMPREF0556_12483 | Hypothetical protein; COG: COG1550; Pfam: PF04456; InterPro: IPR007546. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.884 |
EFI83797.1 | nusA | HMPREF0556_12482 | HMPREF0556_12486 | Hypothetical protein; COG: COG1550; Pfam: PF04456; InterPro: IPR007546. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.748 |
EFI83797.1 | rbfA | HMPREF0556_12482 | HMPREF0556_12481 | Hypothetical protein; COG: COG1550; Pfam: PF04456; InterPro: IPR007546. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.876 |
EFI83797.1 | rimP | HMPREF0556_12482 | HMPREF0556_12487 | Hypothetical protein; COG: COG1550; Pfam: PF04456; InterPro: IPR007546. | Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.675 |
EFI83797.1 | rpsO | HMPREF0556_12482 | HMPREF0556_12478 | Hypothetical protein; COG: COG1550; Pfam: PF04456; InterPro: IPR007546. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.425 |
EFI83797.1 | truB | HMPREF0556_12482 | HMPREF0556_12480 | Hypothetical protein; COG: COG1550; Pfam: PF04456; InterPro: IPR007546. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.627 |
EFI83800.1 | EFI83797.1 | HMPREF0556_12485 | HMPREF0556_12482 | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | Hypothetical protein; COG: COG1550; Pfam: PF04456; InterPro: IPR007546. | 0.754 |
EFI83800.1 | infB | HMPREF0556_12485 | HMPREF0556_12483 | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.932 |
EFI83800.1 | nusA | HMPREF0556_12485 | HMPREF0556_12486 | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.959 |
EFI83800.1 | rbfA | HMPREF0556_12485 | HMPREF0556_12481 | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.823 |
EFI83800.1 | rimP | HMPREF0556_12485 | HMPREF0556_12487 | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.927 |
EFI83800.1 | rpsO | HMPREF0556_12485 | HMPREF0556_12478 | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.446 |
EFI83800.1 | rpsQ | HMPREF0556_12485 | HMPREF0556_10419 | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.420 |
EFI83800.1 | truB | HMPREF0556_12485 | HMPREF0556_12480 | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.719 |
infB | EFI83797.1 | HMPREF0556_12483 | HMPREF0556_12482 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; COG: COG1550; Pfam: PF04456; InterPro: IPR007546. | 0.884 |
infB | EFI83800.1 | HMPREF0556_12483 | HMPREF0556_12485 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; COG: COG2740; Pfam: PF04296; InterPro: IPR007393. | 0.932 |
infB | nusA | HMPREF0556_12483 | HMPREF0556_12486 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | 0.993 |
infB | rbfA | HMPREF0556_12483 | HMPREF0556_12481 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.987 |
infB | rimP | HMPREF0556_12483 | HMPREF0556_12487 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.915 |