STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK60103.1TonB-linked outer membrane protein, SusC/RagA family; Pfam: PF05738,PF07715,PF00593; InterPro: IPR000531. (1118 aa)    
Predicted Functional Partners:
EFK60104.1
Hypothetical protein.
 
   0.968
EFK56480.1
Hypothetical protein.
 
   0.873
EFK58421.1
Hypothetical protein.
 
 
   0.866
EFK59042.1
Hypothetical protein.
 
   0.860
EFK58361.1
Hypothetical protein.
 
   0.858
EFK59361.1
Hypothetical protein.
 
   0.846
EFK57683.1
Hypothetical protein.
 
   0.844
EFK59473.1
Hypothetical protein.
 
   0.839
EFK57920.1
Hypothetical protein.
 
 
   0.838
EFK56239.1
Hypothetical protein.
 
 
   0.833
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.