STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK60132.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
EFK60129.1
Hypothetical protein.
  
     0.669
EFK60131.1
Hypothetical protein.
  
     0.576
EFK60133.1
Hypothetical protein.
       0.568
EFK60127.1
Hypothetical protein.
  
     0.511
EFK57499.1
DNA-binding helix-turn-helix protein; Pfam: PF01381; InterPro: IPR001387.
  
     0.511
EFK60130.1
Hypothetical protein.
  
     0.481
EFK55694.1
DNA-binding helix-turn-helix protein; Pfam: PF01381; InterPro: IPR001387.
  
     0.443
EFK57570.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.