STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK60155.1Site-specific recombinase, phage integrase family; Pfam: PF00589; InterPro: IPR013762; Belongs to the 'phage' integrase family. (414 aa)    
Predicted Functional Partners:
EFK60153.1
Hypothetical protein.
 
     0.844
EFK60152.1
Hypothetical protein.
 
   
 0.835
EFK60154.1
RteC protein.
 
     0.800
EFK60151.1
Hypothetical protein.
 
     0.791
EFK57485.1
Hypothetical protein.
  
     0.759
EFK57548.1
RteC protein.
  
     0.543
EFK60129.1
Hypothetical protein.
  
     0.522
rteC
Putative phage tail component domain protein.
  
     0.511
EFK56964.1
RteC protein.
  
     0.502
EFK60131.1
Hypothetical protein.
  
     0.459
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.