STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK60157.1Glycosyl hydrolase family 25; COG: COG3757; Pfam: PF01183; InterPro: IPR013781. (285 aa)    
Predicted Functional Partners:
EFK60156.1
Hypothetical protein; COG: COG3781; Pfam: PF05249; InterPro: IPR007913.
       0.556
EFK60044.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; COG: COG1705; Pfam: PF01832,PF01476; InterPro: IPR013338.
    
 0.556
EFK60158.1
Rhodanese-like protein; COG: COG0607; Pfam: PF00581; InterPro: IPR001763.
       0.551
trxA
Thioredoxin; COG: COG0526; Pfam: PF00085; InterPro: IPR005746; Belongs to the thioredoxin family.
       0.537
EFK58350.1
Transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
  
  
  0.435
EFK58492.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.