STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59246.1Transcriptional regulator, AraC family; Pfam: PF00165; InterPro: IPR000005. (430 aa)    
Predicted Functional Partners:
EFK59890.1
Transcriptional regulator, AraC family; COG: COG2207; Pfam: PF00165; InterPro: IPR000005.
  
     0.763
EFK56461.1
Transcriptional regulator, AraC family; COG: COG2207; Pfam: PF00165; InterPro: IPR000005.
  
     0.715
EFK59244.1
Transcriptional regulator, AraC family; InterPro: IPR000005.
  
     0.705
EFK56471.1
Transcriptional regulator, AraC family; COG: COG2207; Pfam: PF00165; InterPro: IPR000005.
  
     0.702
pcrR
Transcriptional regulator, AraC family; COG: COG2207; Pfam: PF00165; InterPro: IPR000005.
  
     0.689
EFK59241.1
Transcriptional regulator, AraC family; Pfam: PF00165; InterPro: IPR000005.
  
     0.686
EFK60098.1
Transcriptional regulator, AraC family; COG: COG2207; Pfam: PF00165; InterPro: IPR000005.
  
     0.667
EFK55833.1
Transcriptional regulator, AraC family; Pfam: PF00165; InterPro: IPR000005.
  
     0.606
EFK58256.1
Transcriptional regulator, AraC family; Pfam: PF02311,PF00165; InterPro: IPR000005.
  
     0.599
EFK59247.1
Transcriptional regulator, AraC family; Pfam: PF00165; InterPro: IPR000005.
 
    
0.596
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.