STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59263.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
EFK59264.1
Response regulator receiver domain protein; COG: COG0642; Pfam: PF00512,PF02518,PF00072; InterPro: IPR001789.
       0.709
cheR
CheR methyltransferase, SAM binding domain protein; COG: COG1352; Pfam: PF03705,PF01739; InterPro: IPR000780.
       0.704
cheB
Protein-glutamate methylesterase CheB; COG: COG2201; Pfam: PF01339; InterPro: IPR000673.
       0.680
EFK59267.1
Response regulator receiver domain protein; COG: COG0642; Pfam: PF00072,PF00512,PF02518; InterPro: IPR001789.
       0.680
azu
Putative azurin; COG: COG3241; Pfam: PF00127; InterPro: IPR008972.
       0.523
EFK59262.1
SPFH/Band 7/PHB domain protein; COG: COG4864; Pfam: PF07251; InterPro: IPR010830.
       0.478
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.