STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59315.1Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753,PF00581; InterPro: IPR001279. (462 aa)    
Predicted Functional Partners:
thiF
ThiF family protein; COG: COG0476; Pfam: PF00899,PF05237; InterPro: IPR016040.
  
 0.966
cysI
Nitrite/sulfite reductase ferredoxin domain protein; COG: COG0155; Pfam: PF03460,PF01077,PF05168; InterPro: IPR006067.
    
 0.948
ycbL
Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753; InterPro: IPR001279.
  
 
0.942
EFK60158.1
Rhodanese-like protein; COG: COG0607; Pfam: PF00581; InterPro: IPR001763.
 
0.911
EFK57950.1
Metallo-beta-lactamase domain protein; COG: COG0491; Pfam: PF00753,PF00581; InterPro: IPR001279.
 
0.905
EFK59316.1
Hypothetical protein; COG: COG0730; Pfam: PF01925; InterPro: IPR002781.
 
   
 0.878
naoX
Rhodanese-like protein; COG: COG0607; Pfam: PF00581; InterPro: IPR001763.
 
 0.825
glpE
Rhodanese-like protein; COG: COG0607; Pfam: PF00581; InterPro: IPR001763.
 
0.809
gloA2
Glyoxalase family protein; COG: COG0346; Pfam: PF00903; InterPro: IPR004360.
   
 
 0.798
EFK58387.1
FAD linked oxidase, C-terminal domain protein; COG: COG0277; Pfam: PF01565,PF02913; InterPro: IPR004113.
    
 0.795
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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