Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFK59339.1 | EFK59340.1 | HMPREF0766_10256 | HMPREF0766_10257 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein. | 0.735 |
| EFK59339.1 | EFK59341.1 | HMPREF0766_10256 | HMPREF0766_10258 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein; Pfam: PF00034. | 0.980 |
| EFK59339.1 | EFK59342.1 | HMPREF0766_10256 | HMPREF0766_10259 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein. | 0.977 |
| EFK59339.1 | EFK59345.1 | HMPREF0766_10256 | HMPREF0766_10262 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome C; Pfam: PF00034. | 0.997 |
| EFK59339.1 | EFK59683.1 | HMPREF0766_10256 | HMPREF0766_10600 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Hypothetical protein. | 0.998 |
| EFK59339.1 | ccoN | HMPREF0766_10256 | HMPREF0766_11620 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase, cbb3-type, subunit I; COG: COG3278; Pfam: PF00115,PF02433; InterPro: IPR004677; Belongs to the heme-copper respiratory oxidase family. | 0.962 |
| EFK59339.1 | cox | HMPREF0766_10256 | HMPREF0766_10251 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase, subunit III; COG: COG1845; Pfam: PF00510; InterPro: IPR000298. | 0.999 |
| EFK59339.1 | coxN | HMPREF0766_10256 | HMPREF0766_10255 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome C and quinol oxidase polypeptide I; COG: COG0843; Pfam: PF00115; InterPro: IPR000883; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
| EFK59339.1 | hmoA | HMPREF0766_10256 | HMPREF0766_10261 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Tat pathway signal sequence domain protein; COG: COG0437; Pfam: PF00037. | 0.521 |
| EFK59339.1 | nfrD | HMPREF0766_10256 | HMPREF0766_10260 | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Polysulfide reductase, NrfD; Pfam: PF03916. | 0.658 |
| EFK59340.1 | EFK59339.1 | HMPREF0766_10257 | HMPREF0766_10256 | Hypothetical protein. | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.735 |
| EFK59340.1 | EFK59341.1 | HMPREF0766_10257 | HMPREF0766_10258 | Hypothetical protein. | Hypothetical protein; Pfam: PF00034. | 0.999 |
| EFK59340.1 | EFK59342.1 | HMPREF0766_10257 | HMPREF0766_10259 | Hypothetical protein. | Hypothetical protein. | 0.999 |
| EFK59340.1 | EFK59345.1 | HMPREF0766_10257 | HMPREF0766_10262 | Hypothetical protein. | Cytochrome C; Pfam: PF00034. | 0.996 |
| EFK59340.1 | ccoN | HMPREF0766_10257 | HMPREF0766_11620 | Hypothetical protein. | Cytochrome c oxidase, cbb3-type, subunit I; COG: COG3278; Pfam: PF00115,PF02433; InterPro: IPR004677; Belongs to the heme-copper respiratory oxidase family. | 0.468 |
| EFK59340.1 | cox | HMPREF0766_10257 | HMPREF0766_10251 | Hypothetical protein. | Cytochrome c oxidase, subunit III; COG: COG1845; Pfam: PF00510; InterPro: IPR000298. | 0.549 |
| EFK59340.1 | coxN | HMPREF0766_10257 | HMPREF0766_10255 | Hypothetical protein. | Cytochrome C and quinol oxidase polypeptide I; COG: COG0843; Pfam: PF00115; InterPro: IPR000883; Belongs to the heme-copper respiratory oxidase family. | 0.686 |
| EFK59340.1 | hmoA | HMPREF0766_10257 | HMPREF0766_10261 | Hypothetical protein. | Tat pathway signal sequence domain protein; COG: COG0437; Pfam: PF00037. | 0.999 |
| EFK59340.1 | nfrD | HMPREF0766_10257 | HMPREF0766_10260 | Hypothetical protein. | Polysulfide reductase, NrfD; Pfam: PF03916. | 0.999 |
| EFK59341.1 | EFK59339.1 | HMPREF0766_10258 | HMPREF0766_10256 | Hypothetical protein; Pfam: PF00034. | Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.980 |
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