STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59427.1Hypothetical protein. (187 aa)    
Predicted Functional Partners:
EFK59426.1
Hypothetical protein.
 
     0.887
EFK59425.1
Hypothetical protein.
 
     0.823
EFK59422.1
Hypothetical protein.
 
     0.819
EFK59229.1
Hypothetical protein.
  
     0.770
EFK57217.1
Putative ACR, COG1399; Pfam: PF02620.
  
     0.760
EFK58513.1
Hypothetical protein.
  
     0.736
hemD
uroporphyrinogen-III synthase; Pfam: PF02602.
  
     0.735
EFK58535.1
Hypothetical protein.
  
     0.726
EFK58938.1
Hypothetical protein.
  
     0.718
hepT
Polyprenyl synthetase; COG: COG0142; Pfam: PF00348; InterPro: IPR008949; Belongs to the FPP/GGPP synthase family.
 
     0.714
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.