STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59591.1SPFH/Band 7/PHB domain protein; COG: COG2268; Pfam: PF01145. (706 aa)    
Predicted Functional Partners:
EFK59593.1
PspA/IM30 family protein; COG: COG1842; Pfam: PF04012; InterPro: IPR007157.
 
  
 0.946
EFK59592.1
Hypothetical protein.
 
     0.937
EFK59590.1
Hypothetical protein.
 
     0.878
EFK59594.1
Hypothetical protein.
 
     0.872
EFK59595.1
DNA-binding helix-turn-helix protein; Pfam: PF01381; InterPro: IPR001387.
 
     0.818
EFK56901.1
Leucine Rich Repeat protein; Pfam: PF00560.
  
 
 0.802
EFK57805.1
SPFH/Band 7/PHB domain protein; Pfam: PF01145; InterPro: IPR001107.
     
 0.777
EFK59262.1
SPFH/Band 7/PHB domain protein; COG: COG4864; Pfam: PF07251; InterPro: IPR010830.
   
  
 0.535
EFK56234.1
Hypothetical protein.
  
    0.468
EFK58125.1
Putative ATP synthase F0, A subunit; Pfam: PF01343,PF01957.
   
    0.430
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.