STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59773.1Hypothetical protein; InterPro: IPR016181. (353 aa)    
Predicted Functional Partners:
pglC
Bacterial sugar transferase; COG: COG2148; Pfam: PF02397; InterPro: IPR003362.
 
     0.862
pglE
DegT/DnrJ/EryC1/StrS aminotransferase family protein; COG: COG0399; Pfam: PF01041; InterPro: IPR000653; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.845
EFK59775.1
Acetyltransferase, GNAT family; Pfam: PF00583; InterPro: IPR016181.
 
     0.831
EFK59777.1
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
 
     0.820
EFK59779.1
Glycosyltransferase, group 1 family protein; Pfam: PF00534; InterPro: IPR001296.
 
     0.820
EFK59780.1
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
 
     0.812
EFK59774.1
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
       0.786
asnB
Asparagine synthase (glutamine-hydrolyzing); COG: COG0367; Pfam: PF00310,PF00733; InterPro: IPR006426.
       0.786
EFK59784.1
Polysaccharide biosynthesis protein; Pfam: PF01943; InterPro: IPR002797.
       0.783
pglI
Glycosyltransferase, group 2 family protein; COG: COG0463; Pfam: PF00535; InterPro: IPR001173.
       0.775
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.