STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pglCBacterial sugar transferase; COG: COG2148; Pfam: PF02397; InterPro: IPR003362. (203 aa)    
Predicted Functional Partners:
EFK59748.1
Chain length determinant protein; COG: COG0489; Pfam: PF02706.
 
 
 0.986
pglE
DegT/DnrJ/EryC1/StrS aminotransferase family protein; COG: COG0399; Pfam: PF01041; InterPro: IPR000653; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.986
EFK59777.1
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
  
 0.968
EFK58969.1
Glycosyltransferase, group 1 family protein; Pfam: PF00534.
  
 
 0.929
EFK59780.1
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
 
  
 0.899
EFK59784.1
Polysaccharide biosynthesis protein; Pfam: PF01943; InterPro: IPR002797.
 
  
 0.894
EFK59774.1
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.890
EFK59779.1
Glycosyltransferase, group 1 family protein; Pfam: PF00534; InterPro: IPR001296.
 
  
 0.888
EFK59749.1
Polysaccharide biosynthesis/export protein; Pfam: PF02563; InterPro: IPR003715.
  
 
 0.885
EFK59773.1
Hypothetical protein; InterPro: IPR016181.
 
     0.862
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.