STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59862.1Hypothetical protein; Pfam: PF08922. (163 aa)    
Predicted Functional Partners:
EFK58786.1
Hypothetical protein.
  
     0.634
EFK56666.1
Hypothetical protein.
  
     0.626
ychM
STAS domain protein; COG: COG0659; Pfam: PF00916,PF01740; InterPro: IPR011547.
 
     0.623
EFK56664.1
Hypothetical protein.
  
     0.614
EFK56242.1
F5/8 type C domain protein; Pfam: PF08522,PF00754; InterPro: IPR000421.
  
     0.580
EFK56662.1
Hypothetical protein; Pfam: PF03415; InterPro: IPR005077.
  
     0.539
EFK56370.1
Hypothetical protein.
  
     0.528
EFK58313.1
Hypothetical protein.
  
     0.513
EFK58314.1
Hypothetical protein.
  
     0.487
EFK57111.1
Putative toxin-antitoxin system, toxin component; Pfam: PF08327.
  
     0.464
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.