STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yidKTransporter, SSS family; COG: COG0591; Pfam: PF00474; InterPro: IPR001734; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (567 aa)    
Predicted Functional Partners:
EFK60050.1
N-acetylglucosaminylphosphatidylinositol deacetylase; Pfam: PF02585; InterPro: IPR003737.
 
     0.924
pdh
Proline dehydrogenase; Pfam: PF01619; InterPro: IPR002872.
  
  
 0.736
EFK58386.1
Hypothetical protein.
 
     0.726
EFK59264.1
Response regulator receiver domain protein; COG: COG0642; Pfam: PF00512,PF02518,PF00072; InterPro: IPR001789.
    
 0.666
EFK59668.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00512,PF02518,PF00072; InterPro: IPR003594.
   
 
 0.662
EFK59103.1
Hypothetical protein.
 
     0.659
EFK60049.1
Hypothetical protein; 3.6.3.14.
       0.520
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; COG: COG4365; Belongs to the BshC family.
 
     0.476
EFK59378.1
Hypothetical protein; Pfam: PF00474; InterPro: IPR001734; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.442
EFK56121.1
Response regulator receiver domain protein; COG: COG0642; Pfam: PF05227,PF00672,PF00512,PF02518,PF00072; InterPro: IPR001789.
    
 0.432
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.