STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59182.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
EFK59181.1
Efflux ABC transporter, permease protein; Pfam: PF02687; InterPro: IPR003838.
 
     0.948
EFK59180.1
ABC transporter, ATP-binding protein; COG: COG1136; Pfam: PF00005; InterPro: IPR003593.
 
    0.725
EFK55819.1
Hypothetical protein.
  
     0.655
EFK58923.1
Hypothetical protein.
  
     0.640
EFK56217.1
Hypothetical protein.
  
     0.604
EFK59834.1
Hypothetical protein.
  
     0.602
EFK59025.1
Hypothetical protein.
  
     0.601
EFK58906.1
Hypothetical protein.
  
     0.588
iolE2
AP endonuclease, family 2; Pfam: PF01261; InterPro: IPR013022.
  
     0.568
EFK58532.1
Hypothetical protein.
  
    0.560
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.