STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58938.1Hypothetical protein. (1007 aa)    
Predicted Functional Partners:
EFK58513.1
Hypothetical protein.
  
     0.772
EFK59675.1
Hypothetical protein.
  
     0.763
secG
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.759
yaeT
Outer membrane protein assembly complex, YaeT protein; Pfam: PF07244,PF01103; InterPro: IPR010827.
  
     0.759
EFK59213.1
Hypothetical protein.
  
     0.752
EFK59229.1
Hypothetical protein.
  
     0.724
yfiO
Outer membrane assembly lipoprotein YfiO.
  
     0.724
EFK58535.1
Hypothetical protein.
  
     0.721
EFK59427.1
Hypothetical protein.
  
     0.718
EFK60020.1
Hypothetical protein.
  
     0.713
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.