STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58947.1Putative molybdate ABC transporter, periplasmic molybdate-binding protein. (302 aa)    
Predicted Functional Partners:
EFK58946.1
Hypothetical protein; Pfam: PF08754; InterPro: IPR014865.
 
     0.958
EFK59099.1
ABC transporter, ATP-binding protein; COG: COG1119; Pfam: PF00005; InterPro: IPR003439.
  
  
  0.945
cytA
COG: COG3258; Pfam: PF00034; InterPro: IPR009056.
 
     0.825
EFK56636.1
Hypothetical protein.
  
     0.642
EFK58944.1
LysR substrate binding domain protein; COG: COG0583; Pfam: PF00126,PF03466; InterPro: IPR005119; Belongs to the LysR transcriptional regulatory family.
 
     0.613
EFK59630.1
ABC transporter, ATP-binding protein; COG: COG3839; Pfam: PF00005; InterPro: IPR003593.
    
 0.578
EFK59933.1
Hypothetical protein; COG: COG2898; Pfam: PF03706,PF04329,PF04330; InterPro: IPR005242.
 
     0.548
EFK59358.1
Hypothetical protein.
  
     0.534
pstA
Putative phosphate ABC transporter, permease protein PstA; COG: COG0581; Pfam: PF00528; InterPro: IPR000515.
    
 0.523
pstA-2
Phosphate ABC transporter, permease protein PstA; COG: COG0581; Pfam: PF00528; InterPro: IPR005672.
    
 0.523
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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