STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58966.1Glycosyltransferase, group 1 family protein; Pfam: PF00534. (413 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.791
EFK56615.1
Hypothetical protein; COG: COG1073.
    
 
 0.736
EFK58967.1
Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173.
  
 
  0.735
EFK58968.1
Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173.
  
 
  0.735
otsB
Trehalose-phosphatase; COG: COG0380; Pfam: PF00982,PF02358; InterPro: IPR001830.
  
 0.682
EFK58965.1
Heptosyltransferase; Pfam: PF01075.
  
 
 0.632
EFK57615.1
Hypothetical protein.
  
    0.632
EFK56701.1
Outer membrane insertion signal domain protein.
  
     0.616
EFK58964.1
Hypothetical protein.
  
 
  0.612
EFK57588.1
Hypothetical protein.
  
     0.589
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.