STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58967.1Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173. (271 aa)    
Predicted Functional Partners:
EFK58968.1
Glycosyltransferase, group 2 family protein; Pfam: PF00535; InterPro: IPR001173.
 
    
0.825
EFK58969.1
Glycosyltransferase, group 1 family protein; Pfam: PF00534.
  
 
 0.783
EFK58966.1
Glycosyltransferase, group 1 family protein; Pfam: PF00534.
  
 
  0.735
EFK58965.1
Heptosyltransferase; Pfam: PF01075.
 
  
 0.629
EFK58964.1
Hypothetical protein.
 
     0.610
otsB
Trehalose-phosphatase; COG: COG0380; Pfam: PF00982,PF02358; InterPro: IPR001830.
     
 0.534
nuoJ2
NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
    0.453
nuoH2
NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
  
    0.452
ndhI
4Fe-4S binding domain protein; COG: COG1143; Pfam: PF00037.
  
    0.440
nqoM
Proton-translocating NADH-quinone oxidoreductase, chain M; COG: COG1008; Pfam: PF00361; InterPro: IPR010227.
  
    0.440
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.