STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58972.1Hypothetical protein. (410 aa)    
Predicted Functional Partners:
EFK58970.1
Glycosyltransferase, group 1 family protein; COG: COG0438; Pfam: PF00534; InterPro: IPR001296.
 
  
  0.797
EFK56444.1
Hypothetical protein.
  
     0.772
EFK56666.1
Hypothetical protein.
  
     0.772
EFK58971.1
Glycosyltransferase, group 2 family protein; COG: COG0463; Pfam: PF00535; InterPro: IPR001173.
 
     0.767
EFK56662.1
Hypothetical protein; Pfam: PF03415; InterPro: IPR005077.
  
     0.761
EFK56664.1
Hypothetical protein.
  
     0.756
EFK56166.1
Hypothetical protein.
  
     0.738
EFK58969.1
Glycosyltransferase, group 1 family protein; Pfam: PF00534.
 
  
  0.730
EFK56667.1
DNA/RNA non-specific endonuclease; COG: COG1864; Pfam: PF01223; InterPro: IPR001604.
  
     0.724
EFK56665.1
TonB-dependent receptor; Pfam: PF00593; InterPro: IPR000531.
  
     0.600
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.