STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58973.1Hypothetical protein; Pfam: PF01453. (347 aa)    
Predicted Functional Partners:
EFK58974.1
Hypothetical protein.
       0.773
EFK57332.1
Bifunctional DNA primase/polymerase domain protein; Pfam: PF09250.
  
     0.705
EFK58104.1
Hypothetical protein.
  
     0.597
EFK59701.1
Hypothetical protein.
  
     0.587
EFK58102.1
Hypothetical protein.
  
     0.580
EFK59708.1
SusD family protein; Pfam: PF07980; InterPro: IPR012944.
  
     0.555
sixA
Putative phosphohistidine phosphatase SixA; Pfam: PF00300.
       0.549
EFK59906.1
Arylsulfotransferase (ASST); Pfam: PF05935; InterPro: IPR010262.
  
     0.539
EFK59699.1
Hypothetical protein.
  
     0.529
EFK59358.1
Hypothetical protein.
  
     0.524
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.