STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58974.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
EFK58973.1
Hypothetical protein; Pfam: PF01453.
       0.773
sixA
Putative phosphohistidine phosphatase SixA; Pfam: PF00300.
       0.549
EFK58976.1
Hypothetical protein; COG: COG1331; Pfam: PF03190,PF07221; InterPro: IPR004879; 2.7.4.9.
       0.495
slyD
Peptidyl-prolyl cis-trans isomerase, FKBP-type; COG: COG1047; Pfam: PF00254; InterPro: IPR001179.
       0.459
EFK58972.1
Hypothetical protein.
       0.401
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.