STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltT2Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; Pfam: PF00375; InterPro: IPR001991; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (413 aa)    
Predicted Functional Partners:
EFK58978.1
Hypothetical protein; COG: COG4121; Pfam: PF05430; InterPro: IPR008471.
       0.558
maeB
Putative phosphate acetyltransferase; COG: COG0281; Pfam: PF00390,PF03949,PF01515; InterPro: IPR002505.
  
  
 0.428
fadB
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; COG: COG1250; Pfam: PF02737,PF00725,PF00378; InterPro: IPR016040.
  
 
  0.428
fadJ
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; COG: COG1250; Pfam: PF00378,PF02737,PF00725; InterPro: IPR016040.
  
 
  0.425
EFK56901.1
Leucine Rich Repeat protein; Pfam: PF00560.
    
  0.420
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.