STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58996.1GH3 auxin-responsive promoter; Pfam: PF03321. (504 aa)    
Predicted Functional Partners:
EFK55899.1
Acyl-CoA reductase (LuxC); Pfam: PF05893.
 
 
 0.832
hemD
uroporphyrinogen-III synthase; Pfam: PF02602.
  
     0.750
EFK58995.1
ABC transporter, ATP-binding protein; COG: COG1137; Pfam: PF00005; InterPro: IPR003593.
       0.745
EFK58535.1
Hypothetical protein.
 
     0.745
EFK57750.1
Hypothetical protein.
  
     0.743
EFK55755.1
Hypothetical protein.
  
     0.712
EFK57835.1
Hypothetical protein.
  
     0.671
EFK57822.1
Hypothetical protein.
  
     0.668
EFK58352.1
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
    
 0.663
pruA
1-pyrroline-5-carboxylate dehydrogenase; COG: COG1012; Pfam: PF00171; InterPro: IPR005931; Belongs to the aldehyde dehydrogenase family.
   
 0.660
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.