STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59131.1Hypothetical protein; 1.14.99.36. (409 aa)    
Predicted Functional Partners:
ccoN
Cytochrome c oxidase, cbb3-type, subunit I; COG: COG3278; Pfam: PF00115,PF02433; InterPro: IPR004677; Belongs to the heme-copper respiratory oxidase family.
  
 0.999
EFK59683.1
Hypothetical protein.
  
 0.958
EFK59339.1
Cytochrome C oxidase subunit II, periplasmic domain protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.915
coxN
Cytochrome C and quinol oxidase polypeptide I; COG: COG0843; Pfam: PF00115; InterPro: IPR000883; Belongs to the heme-copper respiratory oxidase family.
  
 0.914
cytA
COG: COG3258; Pfam: PF00034; InterPro: IPR009056.
   
 0.905
EFK59345.1
Cytochrome C; Pfam: PF00034.
   
 0.902
hmoA
Tat pathway signal sequence domain protein; COG: COG0437; Pfam: PF00037.
  
 0.900
nfrD
Polysulfide reductase, NrfD; Pfam: PF03916.
   
 0.899
cox
Cytochrome c oxidase, subunit III; COG: COG1845; Pfam: PF00510; InterPro: IPR000298.
  
 0.843
EFK59335.1
Cytochrome c oxidase, subunit III; Pfam: PF00510.
  
 0.843
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.