STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK59138.1Hypothetical protein; COG: COG1262; Pfam: PF03781; InterPro: IPR005532. (363 aa)    
Predicted Functional Partners:
galns
Arylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917.
 
 
   0.861
EFK58751.1
Arylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917.
 
 
   0.859
arsA
Arylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917.
 
 
   0.857
aslA
Arylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917.
 
 
   0.840
atsA
Arylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917.
 
 
   0.839
arsa
Arylsulfatase; COG: COG3119; Pfam: PF00884; InterPro: IPR000917.
 
 
   0.813
EFK59689.1
Arylsulfatase; Pfam: PF00884; InterPro: IPR000917.
 
 
   0.808
EFK57611.1
Arylsulfatase; Pfam: PF00884; InterPro: IPR000917.
 
 
   0.744
EFK59139.1
Hypothetical protein.
       0.572
EFK57273.1
Hypothetical protein.
   
   0.470
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.