STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58558.1Hypothetical protein. (337 aa)    
Predicted Functional Partners:
EFK58555.1
RHS repeat-associated core domain protein; Pfam: PF05593.
     0.828
EFK58553.1
RHS repeat-associated core domain protein.
 
     0.790
EFK58556.1
Hypothetical protein.
 
     0.790
EFK58034.1
Hypothetical protein.
  
  
  0.734
EFK58565.1
Hypothetical protein.
 
    
0.721
EFK58564.1
Hypothetical protein.
 
    
0.718
EFK58560.1
Hypothetical protein.
 
    
0.704
EFK58563.1
Hypothetical protein.
 
    
0.703
EFK58559.1
Hypothetical protein.
 
    
0.695
EFK58561.1
Hypothetical protein.
 
    
0.683
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.