STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58581.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
gap-2
Glyceraldehyde-3-phosphate dehydrogenase, type I; COG: COG0057; Pfam: PF00044,PF02800; InterPro: IPR000173; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.850
nagB
Glucosamine-6-phosphate deaminase; COG: COG0363; Pfam: PF01182,PF02585; InterPro: IPR004547.
  
 
 0.821
EFK58891.1
Hypothetical protein.
  
  
 
0.817
pfkA-2
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.
       0.807
EFK59470.1
Putative glucosamine-6-phosphate deaminase; COG: COG0363; Pfam: PF01182; InterPro: IPR006148.
  
 
 0.799
nagA-2
N-acetylglucosamine-6-phosphate deacetylase; COG: COG1820; Pfam: PF07969; InterPro: IPR003764.
    
 0.797
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.796
EFK57147.1
Hypothetical protein; Pfam: PF07659; InterPro: IPR011630.
  
     0.745
gldM
Gliding motility-associated protein GldM.
  
     0.738
EFK57146.1
DoxX family protein; Pfam: PF07681.
  
     0.738
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.