STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58608.1Transcriptional regulator, LuxR family; COG: COG2197; Pfam: PF00072,PF00196; InterPro: IPR011991. (216 aa)    
Predicted Functional Partners:
EFK59264.1
Response regulator receiver domain protein; COG: COG0642; Pfam: PF00512,PF02518,PF00072; InterPro: IPR001789.
 
 0.989
EFK56121.1
Response regulator receiver domain protein; COG: COG0642; Pfam: PF05227,PF00672,PF00512,PF02518,PF00072; InterPro: IPR001789.
 
 0.961
EFK58053.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG4585; Pfam: PF00515,PF07730,PF02518; InterPro: IPR003594.
 
 0.885
zraS
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Pfam: PF07696,PF07695,PF07730,PF02518; InterPro: IPR011623.
 
 0.885
EFK59267.1
Response regulator receiver domain protein; COG: COG0642; Pfam: PF00072,PF00512,PF02518; InterPro: IPR001789.
 
 0.883
EFK59668.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG0642; Pfam: PF00512,PF02518,PF00072; InterPro: IPR003594.
 
 
 0.883
uhpB
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Pfam: PF07719,PF07730,PF02518; InterPro: IPR003594.
 
 0.883
uhpB2
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; COG: COG4564; Pfam: PF02518; InterPro: IPR003594.
 
 0.881
EFK58796.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; Pfam: PF07730,PF02518; InterPro: IPR003594.
 
 0.867
EFK59726.1
Tetratricopeptide repeat protein; Pfam: PF08281.
  
 0.861
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.