STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58620.1Hypothetical protein. (343 aa)    
Predicted Functional Partners:
EFK58621.1
Hypothetical protein.
 
     0.707
EFK59251.1
Hypothetical protein.
  
     0.692
EFK56701.1
Outer membrane insertion signal domain protein.
  
     0.655
EFK56370.1
Hypothetical protein.
  
     0.613
EFK58290.1
TonB family domain protein.
 
     0.592
EFK56377.1
OmpA family protein; Pfam: PF00691; InterPro: IPR006665.
  
     0.587
EFK56374.1
OmpA family protein; Pfam: PF00691; InterPro: IPR006665.
  
     0.578
EFK58044.1
SusD family protein; Pfam: PF07980; InterPro: IPR012944.
  
     0.556
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
 
     0.553
EFK58269.1
Hypothetical protein; 1.14.99.36.
  
     0.525
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.