STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slyATranscriptional regulator, MarR family; Pfam: PF01047; InterPro: IPR011991. (156 aa)    
Predicted Functional Partners:
EFK56477.1
Hypothetical protein.
  
     0.620
EFK58981.1
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
     0.618
EFK55701.1
Hypothetical protein.
  
     0.610
EFK58381.1
Hypothetical protein.
  
     0.577
EFK59103.1
Hypothetical protein.
  
     0.558
feoA
FeoA domain protein; Pfam: PF04023.
     
 0.543
feoB
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
       0.541
EFK55716.1
Tetratricopeptide repeat protein.
  
     0.502
bshB1
Bacillithiol biosynthesis deacetylase BshB1; COG: COG2120; Pfam: PF02585; InterPro: IPR003737.
  
     0.476
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; COG: COG4365; Belongs to the BshC family.
  
     0.471
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.