STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58772.1TonB-linked outer membrane protein, SusC/RagA family; Pfam: PF07660,PF07715,PF00593; InterPro: IPR012910. (1161 aa)    
Predicted Functional Partners:
EFK58773.1
Hypothetical protein; Pfam: PF07980; InterPro: IPR012944.
 
     0.950
EFK58776.1
Antioxidant, AhpC/TSA family; COG: COG0526; Pfam: PF00578; InterPro: IPR012335.
 
     0.871
EFK58645.1
Hypothetical protein.
 
     0.796
EFK58644.1
Hypothetical protein.
  
     0.774
EFK58643.1
Hypothetical protein.
  
     0.773
EFK58774.1
Hypothetical protein.
       0.773
EFK58777.1
Hypothetical protein; 3.4.23.-.
 
     0.762
EFK58775.1
Hypothetical protein.
       0.757
EFK58872.1
SusD family protein; Pfam: PF07980; InterPro: IPR012944.
  
     0.728
EFK58361.1
Hypothetical protein.
  
     0.723
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.