STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58839.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
ubiE
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
 
     0.867
sdh
Oxidoreductase, short chain dehydrogenase/reductase family protein; COG: COG4221; Pfam: PF00106; InterPro: IPR002198; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.816
EFK58841.1
YqeY-like protein; COG: COG1610; Pfam: PF02637; InterPro: IPR003789.
       0.784
EFK56849.1
Hypothetical protein.
  
     0.716
EFK59035.1
Tetratricopeptide repeat protein; Pfam: PF00515.
  
   
 0.662
EFK59390.1
Hypothetical protein.
  
   
 0.653
EFK58847.1
Outer membrane insertion signal domain protein.
 
   
 0.648
EFK58842.1
Acetyltransferase, GNAT family; COG: COG2153; Pfam: PF00583; InterPro: IPR016181.
       0.621
gldN
Gliding motility-associated protein GldN.
 
   
 0.587
gldM
Gliding motility-associated protein GldM.
 
   
 0.541
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.