STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58269.1Hypothetical protein; 1.14.99.36. (349 aa)    
Predicted Functional Partners:
EFK58268.1
Hypothetical protein.
       0.709
EFK56741.1
Hypothetical protein.
  
     0.709
EFK59287.1
Hypothetical protein.
  
     0.693
EFK59811.1
Hypothetical protein.
  
     0.643
EFK58003.1
Tetratricopeptide repeat protein; Pfam: PF07719,PF00515; InterPro: IPR011990.
  
     0.631
EFK57066.1
Hypothetical protein.
  
     0.618
EFK58409.1
Hypothetical protein.
  
     0.613
EFK58923.1
Hypothetical protein.
  
     0.578
EFK59025.1
Hypothetical protein.
  
     0.568
EFK58521.1
Hypothetical protein.
  
     0.542
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.