STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acdA2acyl-CoA dehydrogenase, C-terminal domain protein; COG: COG1960; Pfam: PF02771,PF02770,PF00441; InterPro: IPR013764. (592 aa)    
Predicted Functional Partners:
fadB
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; COG: COG1250; Pfam: PF02737,PF00725,PF00378; InterPro: IPR016040.
 
 0.992
fadJ
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; COG: COG1250; Pfam: PF00378,PF02737,PF00725; InterPro: IPR016040.
 
 0.988
etfA
Electron transfer flavoprotein FAD-binding domain protein; COG: COG2025; Pfam: PF01012,PF00766; InterPro: IPR014730.
 0.980
etfB
Electron transfer flavoprotein domain protein; COG: COG2086; Pfam: PF01012; InterPro: IPR012255.
 
 
 0.976
atoB2
acetyl-CoA C-acetyltransferase; COG: COG0183; Pfam: PF00108,PF02803; InterPro: IPR002155; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.890
crt
enoyl-CoA hydratase/isomerase family protein; COG: COG1024; Pfam: PF00378; InterPro: IPR001753; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.850
EFK59955.1
enoyl-CoA hydratase/isomerase family protein; Pfam: PF00378; InterPro: IPR001753; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.801
EFK56424.1
enoyl-CoA hydratase/isomerase family protein; COG: COG1024; Pfam: PF00378; InterPro: IPR001753.
 
 0.730
atoB
acetyl-CoA C-acetyltransferase; COG: COG0183; Pfam: PF00108,PF02803; InterPro: IPR002155; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.670
fadD
AMP-binding enzyme; COG: COG1022; Pfam: PF00501; InterPro: IPR000873.
  
 0.630
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.