STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFK58306.1Transcriptional regulator, MarR family; Pfam: PF01047; InterPro: IPR000835. (155 aa)    
Predicted Functional Partners:
fadB
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein; COG: COG1250; Pfam: PF02737,PF00725,PF00378; InterPro: IPR016040.
     
 0.845
EFK59680.1
Hypothetical protein.
  
     0.664
EFK55701.1
Hypothetical protein.
  
     0.647
EFK59987.1
Hypothetical protein.
  
     0.597
EFK56388.1
Hypothetical protein.
  
     0.597
EFK56477.1
Hypothetical protein.
  
     0.595
atoB2
acetyl-CoA C-acetyltransferase; COG: COG0183; Pfam: PF00108,PF02803; InterPro: IPR002155; Belongs to the thiolase-like superfamily. Thiolase family.
       0.569
EFK59674.1
Hypothetical protein.
  
     0.539
EFK56547.1
Hypothetical protein.
  
     0.504
EFK58373.1
Hypothetical protein.
  
     0.482
Your Current Organism:
Sphingobacterium spiritivorum
NCBI taxonomy Id: 525373
Other names: S. spiritivorum ATCC 33861, Sphingobacterium spiritivorum ATCC 33861, Sphingobacterium spiritivorum str. ATCC 33861, Sphingobacterium spiritivorum strain ATCC 33861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.